Package: RDML 1.3

Konstantin A. Blagodatskikh

RDML: Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files

Imports real-time thermo cycler (qPCR) data from Real-time PCR Data Markup Language (RDML) and transforms to the appropriate formats of the 'qpcR' and 'chipPCR' packages. Contains a dendrogram visualization for the structure of RDML object and GUI for RDML editing.

Authors:Konstantin A. Blagodatskikh [cre, aut], Stefan Roediger [aut], Michal Burdukiewicz [aut], Andrej-Nikolai Spiess [aut]

RDML_1.3.tar.gz
RDML_1.3.zip(r-4.5)RDML_1.3.zip(r-4.4)RDML_1.3.zip(r-4.3)
RDML_1.3.tgz(r-4.4-any)RDML_1.3.tgz(r-4.3-any)
RDML_1.3.tar.gz(r-4.5-noble)RDML_1.3.tar.gz(r-4.4-noble)
RDML_1.3.tgz(r-4.4-emscripten)RDML_1.3.tgz(r-4.3-emscripten)
RDML.pdf |RDML.html✨
RDML/json (API)

Peer review:

Bug tracker:https://github.com/pcruniversum/rdml/issues

On CRAN:

bioinformaticspcrqpcrrdml

47 exports 21 stars 3.20 score 34 dependencies 1 dependents 8 mentions 56 scripts 343 downloads

Last updated 19 days agofrom:a898512fd9. Checks:OK: 5 NOTE: 2. Indexed: yes.

Exports:adpsTypeannotationTypeAsDendrogramAsTablecdnaSynthesisMethodTypecommercialAssayTypecqDetectionMethodTypedataCollectionSoftwareTypedataTypedocumentationTypedyeTypeexperimenterTypeexperimentTypeGetFDatagradientTypeidReferencesTypeidTypelabelFormatTypelidOpenTypeloopTypemdpsTypemeasureTypeMergeRDMLsnucleotideTypeoligoTypepauseTypepcrFormatTypeprimingMethodTypequantityTypequantityUnitTypeRDMLrdmlEditrdmlIdTypereactIdTypereactTyperunTypesampleTypesampleTypeTypesequencesTypeSetFDatastepTypetargetTypetargetTypeTypetemperatureTypetemplateQuantityTypethermalCyclingConditionsTypexRefType

Dependencies:backportscellrangercheckmateclicpp11crayondata.tablefansigenericsgluehmsjsonlitelifecyclelubridatemagrittrpillarpipeRpkgconfigprettyunitsprogressR6readxlrematchrlangrliststringistringrtibbletimechangeutf8vctrsXMLxml2yaml