Package: MBmca 1.0.1

Stefan Roediger

MBmca: Nucleic Acid Melting Curve Analysis

Lightweight utilities for nucleic acid melting curve analysis are important in life sciences and diagnostics. This software can be used for the analysis and presentation of melting curve data from microbead-based assays (surface melting curve analysis) and reactions in solution (e.g., quantitative PCR (qPCR), real-time isothermal Amplification). Further information are described in detail in two publications in The R Journal [ <https://journal.r-project.org/archive/2013-2/roediger-bohm-schimke.pdf>; <https://journal.r-project.org/archive/2015-1/RJ-2015-1.pdf>].

Authors:Stefan Roediger [cre, aut], Michal Burdukiewicz [aut]

MBmca_1.0.1.tar.gz
MBmca_1.0.1.zip(r-4.7)MBmca_1.0.1.zip(r-4.6)MBmca_1.0.1.zip(r-4.5)
MBmca_1.0.1.tgz(r-4.6-any)MBmca_1.0.1.tgz(r-4.5-any)
MBmca_1.0.1.tar.gz(r-4.7-any)MBmca_1.0.1.tar.gz(r-4.6-any)
MBmca_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
MBmca/json (API)

# Install 'MBmca' in R:
install.packages('MBmca', repos = c('https://pcruniversum.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pcruniversum/mbmca/issues

Datasets:
  • DMP - Bimodal melting curve experiment on the surface of microbeads.
  • DualHyb - Surface melting curve data from direct hybridization experiment of short oligonucleotide probes with bimodal melting curve pattern.
  • MultiMelt - Surface melting curve data from direct hybridization experiment of short oligonucleotides.

On CRAN:

Conda:

5.01 score 4 stars 1 packages 17 scripts 239 downloads 5 exports 48 dependencies

Last updated from:def2bb5807. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE152
source / vignettesOK186
linux-release-x86_64NOTE146
macos-release-arm64NOTE106
macos-oldrel-arm64NOTE106
windows-develNOTE119
windows-releaseNOTE102
windows-oldrelNOTE97
wasm-releaseOK107

Exports:diffQdiffQ2mcaPeaksmcaSmootherMFIerror

Dependencies:base64encbslibcachemchipPCRclicommonmarkDEoptimRdigestfastmapfontawesomefsgluehtmltoolshttpuvjquerylibjsonlitelaterlatticelifecyclelmtestmagrittrMASSMatrixMatrixModelsmemoisemimeoteloutlierspromisesptwquantregR6rappdirsRcppRcppArmadilloRcppDERfitrlangrobustbasesassshinysignalsourcetoolsSparseMsurvivalwithrxtablezoo

Microbead Surface Nucleic Acid Melting Curve Analysis

The chipPCR package authors

Rendered fromMBmca.Rmdusingknitr::rmarkdownon May 10 2026.

Last update: 2021-03-07
Started: 2021-02-27